Data organization
Data organization
An Nipoppy dataset consists of a specific directory structure to organize MRI and tabular data.
Directories:
tabular
- contains
manifest.csv
demographics
: contains demographic data (e.g. age, sex)assessments
: contains clinical assessments (e.g. MoCA)
- contains
downloads
: data dumps from remote data-stores (e.g. LONI)scratch
: space for un-organized data and wranglingdicom
: participant-level dicom dirsbids
: BIDS formatted datasetderivatives
: output of processing pipelines (e.g. fmriprep, mriqc)proc
: space for config and log files of the processing pipelinesbackups
: data backup space (tars)releases
: data releases (symlinks)